miRBase entry: eca-mir-9043

Stem-loop eca-mir-9043


Accession
MI0028210
Description
Equus caballus eca-mir-9043 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
cuggcucauggccucucccaagaccugcccUUGGACCUCAGUUCCUGGCAUCCgguugcuggagaccaagguugccagggaccaaggccucugggccucagaagguucuuggcugccugcu
..((((...))))....(((((((((((((..((.(((..((((((((((.((((((......))))..)).))))))))))..)))))...))))......))).)))))).........

Structure
cuggcucauggccucuc      -   ------    -UU  A   CA          U  --    gc 
                 ccaaga ccu      gccc   GG CCU  GUUCCUGGCA CC  gguu  u
                 |||||| |||      ||||   || |||  |||||||||| ||  ||||   
                 gguucu gga      cggg   cc gga  cagggaccgu gg  ccag  g
--------ucguccguc      u   agacuc    ucu  -   ac          u  aa    ag 


Annotation confidence Not enough data
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Genome context
chr1: 7328609-7328729 [+]

Database links

Mature eca-miR-9043

Accession MIMAT0034586
Description Equus caballus eca-miR-9043 mature miRNA
Sequence 31 - UUGGACCUCAGUUCCUGGCAUCC - 53
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545