miRBase entry: eca-mir-9071

Stem-loop eca-mir-9071


Accession
MI0028244
Description
Equus caballus eca-mir-9071 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
cugccaccucguggccauauugagaacugcuccaaagggagcuggggcugggcgugcagaggugucauuuUGCCACCGCUCUUUGGAGCCUGCUCggguaguucccugaggucugcaacuucauc
..(((((...)))))......(((....(((((((..(((((.(((((..((((........)))).....))).))))))))))))))...)))(((.....)))((((((.....))))))..

Structure
---------cugccaccucguggccauauu   aacu       ag     u  -   ---ug    ugc 
                              gag    gcuccaa  ggagc gg ggc     ggcg   a
                              |||    |||||||  ||||| || |||     ||||    
                              CUC    CGAGGUU  UCUCG CC CCG     cugu   g
cuacuucaacgucuggagucccuugauggg   -GUC       --     -  A   Uuuua    gga 


Annotation confidence Not enough data
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Genome context
chr3: 114891954-114892078 [+]

Database links

Mature eca-miR-9071

Accession MIMAT0034616
Description Equus caballus eca-miR-9071 mature miRNA
Sequence 71 - UGCCACCGCUCUUUGGAGCCUGCUC - 95
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545