miRBase entry: eca-mir-9081

Stem-loop eca-mir-9081


Accession
MI0028254
Description
Equus caballus eca-mir-9081 precursor miRNA


Sequence

8 reads, 1 reads per million, 1 experiments
guuucaauucagugcguacuuucaaauaucuugggagcuuUUAGACAAUACUGAUGCCUGGGCuccauuugcuagaaauguccaguaauuggccuuggguaaggcccagguaucaguauuguuuagaaauuccccagacaa
............................(((.(((((.(((((((((((((((((((((((((((((.(((((.((....)).))))).)))..........)))))))))))))))))))))))))).))))).)))...

Structure
guuucaauucagugcguacuuucaaaua   u     c                          ----------   u     a  a 
                            ucu gggag uuUUAGACAAUACUGAUGCCUGGGCu          cca uugcu ga a
                            ||| ||||| ||||||||||||||||||||||||||          ||| ||||| ||  
                            aga cccuu aagauuuguuaugacuauggacccgg          ggu aauga cu u
-------------------------aac   c     a                          aauggguucc   u     c  g 


Annotation confidence Not enough data
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Genome context
chr4: 44746996-44747136 [-]

Database links

Mature eca-miR-9081

Accession MIMAT0034626
Description Equus caballus eca-miR-9081 mature miRNA
Sequence 41 - UUAGACAAUACUGAUGCCUGGGC - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545