miRBase entry: eca-mir-9108

Stem-loop eca-mir-9108


Accession
MI0028286
Description
Equus caballus eca-mir-9108 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
aggggagccagggcaagcaggcuguUGAGCAGAGGGCCAGGUGGCACCAGgggggaccguccgcauccccacuaugccccagccugaaccuguguucuaacggcaggugacuggc
......(((((.....((..(((((((((((.(((..(((((((((..((.(((((.........))))).)).))))...)))))..))).))))).))))))..))..)))))

Structure
agggga     ggcaa  ag      -     G   GC     ---    CC  g     ccg 
      gccag     gc  gcuguU GAGCA AGG  CAGGU   GGCA  AG gggga   u
      |||||     ||  |||||| ||||| |||  |||||   ||||  || |||||   c
      cgguc     ug  cggcaa cuugu ucc  guccg   ccgu  uc ccccu   c
------     ---ag  ga      u     g   aa     acc    -a  a     acg 


Annotation confidence Not enough data
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Genome context
chr11: 61086977-61087091 [-]

Database links

Mature eca-miR-9108

Accession MIMAT0034656
Description Equus caballus eca-miR-9108 mature miRNA
Sequence 26 - UGAGCAGAGGGCCAGGUGGCACCAG - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545