miRBase entry: eca-mir-9122

Stem-loop eca-mir-9122


Accession
MI0028303
Description
Equus caballus eca-mir-9122 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
cccccaccccaccccuccaaggaucugaucucuucucucaggaaggaugauguucuccagugagcccaggggagaUCCUGGACAUCAGGCCUGGCCGAGGgagcaccgaguuccagucuuucccaaggugggaag
.......((((((.....((((((..((.((((((((((.((.(((.((((((.(((....))).((((((....))))))))))))..)))..)))))))))....))).))..)))))).....))))))...

Structure
cccccac      ccucc      cu  u   ----       a  -a   -a      ucuccagugagc      g 
       cccacc     aaggau  ga cuc    uucucuc gg  agg  ugaugu            ccaggg a
       ||||||     ||||||  || |||    ||||||| ||  |||  ||||||            ||||||  
       gggugg     uuucug  cu gag    gagGGAG CC  UCC  ACUACA            GGUCCU g
----gaa      aaccc      ac  u   ccac       -  GG   GG      ------------      a 


Annotation confidence Not enough data
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Genome context
chr12: 26329929-26330063 [-]

Database links

Mature eca-miR-9122

Accession MIMAT0034672
Description Equus caballus eca-miR-9122 mature miRNA
Sequence 76 - UCCUGGACAUCAGGCCUGGCCGAGG - 100
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545