miRBase entry: eca-mir-9125

Stem-loop eca-mir-9125


Accession
MI0028307
Description
Equus caballus eca-mir-9125 precursor miRNA


Sequence

6 reads, 1 reads per million, 1 experiments
acccccaucccaccccugaccggagcccugugcccUCAGCUCCCAGGUGUGUCCUCGGCCgagccguggauggagagggcgggguauccugggagccugggugaguggcuccugcccggcccaggcccuggagag
.......(((((..((((.((((((((((..((((...(((((((((.(((.(((((.((...((......))...)).)))))))))))))))))..)))).)).)))))).....))..))))...))).)).

Structure
accccca  -   -cc    -a  -----      -  gu    UCA         U   U     G  gag  gu 
       uc cca   ccug  cc     ggagcc cu  gccc   GCUCCCAGG GUG CCUCG CC   cc  g
       || |||   ||||  ||     |||||| ||  ||||   ||||||||| ||| ||||| ||   ||   
       ag ggu   ggac  gg     ccucgg ga  uggg   cgagggucc uau ggggc gg   gg  g
------g  a   ccc    cc  cccgu      u  -g    -uc         -   -     g  aga  ua 


Annotation confidence Not enough data
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Genome context
chr30: 4470733-4470867 [-]

Database links

Mature eca-miR-9125

Accession MIMAT0034676
Description Equus caballus eca-miR-9125 mature miRNA
Sequence 36 - UCAGCUCCCAGGUGUGUCCUCGGCC - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545