miRBase entry: eca-mir-9133

Stem-loop eca-mir-9133


Accession
MI0028316
Description
Equus caballus eca-mir-9133 precursor miRNA


Sequence

uucugggggccggcagagguggggcucguggucuugaggcUGUGGAGAGAGAUGAUCUGGCAgguuucccaugugccucucgucuuuucuccaggccguggccgcggugacaguugcuuuuaccaaagaagcauugagg
.....(((.((.((....)).)).)))((((((....((((.(((((((((((((...((((.((.....)).))))..))))).))))))))))))..)))))).....((((.((((((.....))))))))))...

Structure
-------uucugggggccggcagagguggggcuc      uuga    G        -     UCU    g  u 
                                  gugguc    ggcU UGGAGAGA GAUGA   GGCA gu u
                                  ||||||    |||| |||||||| |||||   |||| || c
                                  cgccgg    ccgg accucuuu cugcu   ccgu ua c
ggaguuacgaagaaaccauuuucguugacagugg      --ug    -        u     -cu    g  c 


Annotation confidence Not enough data
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Genome context
chr13: 8689378-8689516 [-]

Database links

Mature eca-miR-9133

Accession MIMAT0034684
Description Equus caballus eca-miR-9133 mature miRNA
Sequence 41 - UGUGGAGAGAGAUGAUCUGGCA - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545