miRBase entry: eca-mir-9140

Stem-loop eca-mir-9140


Accession
MI0028324
Description
Equus caballus eca-mir-9140 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
acagccccaucugucguaggcuggcccagggguggccggggaccuuggaccaggcagcagggaguggcugagccaUGCUGCACCCUGGGACCUCUGGCCUcccggcgagggucagaugccccgggaugggguggc
...(((((((((...(((..(((((((..(((.((((((((.....(..(((((..((((...(((((...))))).))))..)))))..))))))))).))).....))))))).)))....)))))))))...

Structure
aca         -guc   gg       ---ag   u        accuu ga     ca    gga     u 
   gccccaucu    gua  cuggccc     ggg ggccgggg     g  ccagg  gcag   guggc  
   |||||||||    |||  |||||||     ||| ||||||||     |  |||||  ||||   ||||| g
   ugggguagg    cgu  gacuggg     ccc CCGGUCUC     C  GGUCC  CGUC   Uaccg  
cgg         gccc   -a       agcgg   U        ----- AG     CA    --G     a 


Annotation confidence Not enough data
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Genome context
chr13: 42100166-42100300 [-]

Database links

Mature eca-miR-9140

Accession MIMAT0034692
Description Equus caballus eca-miR-9140 mature miRNA
Sequence 76 - UGCUGCACCCUGGGACCUCUGGCCU - 100
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545