miRBase entry: eca-mir-9162

Stem-loop eca-mir-9162


Accession
MI0028386
Description
Equus caballus eca-mir-9162 precursor miRNA


Sequence

4 reads, 1 reads per million, 1 experiments
uaaccuuagcagcagccuccauaaaauagcccuagcacccagaguccaagcagcugcagacagaaucguaaaggccuCCCUGCAGAUGACUGGACUCCAggcgcuccuggcugcaacagguugccguggcuguggggag
...((.((((.(((((((........(((((..(((.((..(((((((..((.((((((..((..((.....)).))..)))))).))..)))))))..)).)))...)))))....)))))))....)))).))....

Structure
-uaa  u    ---a       ccauaaaa     -cu   a  ca       ag  g      ac  aa  g 
    cc uagc    gcagccu        uagcc   agc cc  gagucca  ca cugcag  ag  uc u
    || ||||    |||||||        |||||   ||| ||  |||||||  || ||||||  ||  || a
    gg gucg    cguugga        gucgg   ucg gg  CUCAGGU  GU GACGUC  uc  gg a
gagg  u    gugc       ----caac     ucc   c  AC       CA  A      CC  -c  a 


Annotation confidence Not enough data
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Genome context
chr14: 34117748-34117886 [-]

Database links

Mature eca-miR-9162

Accession MIMAT0034739
Description Equus caballus eca-miR-9162 mature miRNA
Sequence 78 - CCCUGCAGAUGACUGGACUCCA - 99
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545