miRBase entry: eca-mir-9167

Stem-loop eca-mir-9167


Accession
MI0028392
Description
Equus caballus eca-mir-9167 precursor miRNA


Sequence

3 reads, 0 reads per million, 1 experiments
cucucugcugucugucuggcaugacuaauguggagggugcUGUCUCCGGCCAUGCCCACUUCUACuaacugagugagacgugacgcuggugcauggauggaccguccggaccccugguugggaaugcauaggagagccaggaggg
..((((.(((.((.(((.((((..(((((..((.((((.((((..((((((((((.((((.(........))))).).))))..))))).))).(((((...)))))).)))))).)))))..))))...))).)).))).))))

Structure
cu    g   u  g   --g    ga     gu  a    g --------------   CU     --    - C    U UAC 
  cucu cug cu ucu   gcau  cuaau  gg gggu c              UGU  CCGGC  CAUG C CACU C   u
  |||| ||| || |||   ||||  |||||  || |||| |              |||  |||||  |||| | |||| |    
  ggga gac ga agg   cgua  gguug  uc ccca g              acg  ggucg  gugc g guga g   a
--    g   c  g   aua    ag     -g  -    g ccugccagguaggu   -u     ca    a a    - uca 


Annotation confidence Not enough data
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Genome context
chr16: 41603095-41603239 [+]

Database links

Mature eca-miR-9167

Accession MIMAT0034745
Description Equus caballus eca-miR-9167 mature miRNA
Sequence 41 - UGUCUCCGGCCAUGCCCACUUCUAC - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545