miRBase entry: eca-mir-9182

Stem-loop eca-mir-9182


Accession
MI0028412
Description
Equus caballus eca-mir-9182 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
acugauggugcuacuuugaacugcuuuucuuuucuccuuuUUGCACAAAGAGUCUCAUGUCUgauauuuagacaugaugagcuuugugcaaaaggggaccugguuacugcuugcucugcuucaucccacucuuauucug
...(((((.((......(....((....((....((((((((((((((((..((((((((((((...)))))))))).)).))))))))))))))))....)).....))...)...)).)))))..............

Structure
-----------acu     u  uacuuu aacu  -uuuu  uuuc                AG  -          u 
              gaugg gc      g    gc     cu    uccuuuUUGCACAAAG  UC UCAUGUCUga  
              ||||| ||      |    ||     ||    ||||||||||||||||  || |||||||||| a
              cuacu cg      c    cg     gg    ggggaaaacguguuuc  ag aguacagauu  
gucuuauucucacc     u  ---ucu -guu  ucauu  ucca                -g  u          u 


Annotation confidence Not enough data
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Genome context
chr18: 65487257-65487395 [+]

Database links

Mature eca-miR-9182

Accession MIMAT0034763
Description Equus caballus eca-miR-9182 mature miRNA
Sequence 41 - UUGCACAAAGAGUCUCAUGUCU - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545