miRBase entry: eca-mir-8932-2

Stem-loop eca-mir-8932-2


Accession
MI0028415
Description
Equus caballus eca-mir-8932-2 precursor miRNA
Gene family
MIPF0002071; mir-8932


Sequence

1 reads, 0 reads per million, 1 experiments
gacacugcugcugcucucuggggagcuggccgagguggcuugcccgcgugccgggggcucuggcgccaguggcacgUGUGCUGGGAGCGCCUGAGCCgugguggccgcacgggcugcccagaggcgcccggggggcu
............((.(((((((.(((...(((..((((((...(((((.((((((.(((((.(((((........).))))..))))).)))).))))))).)))))).)))))).)))))))))((((...)))).

Structure
gacacugcugcu  u       g   ugg   ag      ugc     u  -    g     -g    - agu 
            gc cucuggg agc   ccg  guggcu   ccgcg gc cggg gcucu  gcgc c   g
            || ||||||| |||   |||  ||||||   ||||| || |||| |||||  |||| |    
            cg gagaccc ucg   ggc  cgccgg   ggugC CG GUCC CGAGG  CGUG g   g
ucggggggcccg  -       g   ---   -a      --u     -  A    G     GU    U cac 


Annotation confidence Not enough data
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Genome context
chr18: 3400812-3400948 [+]

Database links

Mature eca-miR-8932

Accession MIMAT0034460
Description Equus caballus eca-miR-8932 mature miRNA
Sequence 77 - UGUGCUGGGAGCGCCUGAGCC - 97
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545