miRBase entry: eca-mir-9185

Stem-loop eca-mir-9185


Accession
MI0028417
Description
Equus caballus eca-mir-9185 precursor miRNA
Gene family
MIPF0001982; mir-9080


Sequence

23 reads, 3 reads per million, 1 experiments
uuaaucgguccuccguauccacgguccugcAUCCGCGGAUUGAACCAGCCACGUAguaugucuauaauacgugguugguugaauccgcagaugugaaacccgcggauaccgucggccgacuguac
....((((((..(.((((((.(((...((((((.(((((((.(((((((((((((.(((....))).))))))))))))).))))))).))))))....))).)))))).)..))))))......

Structure
--uuaa      cu c      a   -ucc      C       G             g   g 
      ucgguc  c guaucc cgg    ugcAUC GCGGAUU AACCAGCCACGUA uau u
      ||||||  | |||||| |||    |||||| ||||||| ||||||||||||| |||  
      agccgg  g cauagg gcc    guguag cgccuaa uugguuggugcau aua c
cauguc      cu c      c   caaa      a       g             a   u 


Annotation confidence Not enough data
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Genome context
chr18: 54705932-54706056 [-]

Database links

Mature eca-miR-9185

Accession MIMAT0034766
Description Equus caballus eca-miR-9185 mature miRNA
Sequence 31 - AUCCGCGGAUUGAACCAGCCACGUA - 55
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545