miRBase entry: efu-mir-9242-1

Stem-loop efu-mir-9242-1


Accession
MI0028532
Description
Eptesicus fuscus efu-mir-9242-1 precursor miRNA
Gene family
MIPF0002032; mir-9242


Sequence

uggccuggccUCCCUCUGUGGGGCGAUCGAUCguggagcccucccccauugauugccuugcagaggguggccugagucuc
.((((.((((.((((((((((((((((((((.(.(((....))).).)))))))))))))))))))).)))).).)))..

Structure
-u   - u    U                    C u   g 
  ggc c ggcc CCCUCUGUGGGGCGAUCGAU g gga c
  ||| | |||| |||||||||||||||||||| | |||  
  cug g ccgg gggagacguuccguuaguua c ccu c
cu   a u    u                    c c   c 


Annotation confidence Not enough data
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Genome context
JH977632.1: 3304763-3304842 [-]

Database links

Mature efu-miR-9242

Accession MIMAT0034825
Description Eptesicus fuscus efu-miR-9242 mature miRNA
Sequence 11 - UCCCUCUGUGGGGCGAUCGAUC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545