miRBase entry: efu-mir-9186l

Stem-loop efu-mir-9186l


Accession
MI0028588
Description
Eptesicus fuscus efu-mir-9186l precursor miRNA
Gene family
MIPF0001868; mir-9186


Sequence

agggugaaggUUGCGGUAUGGCUGGUACUGAGAuaauggcugcuccaguaucagacaugccgccccccucccuguac
((((.(..((..((((((((.(((((((((.((..........))))))))))).))))))))))..).))))....

Structure
----    u aa  UU        G         A  uaau 
    aggg g  gg  GCGGUAUG CUGGUACUG GA    g
    |||| |  ||  |||||||| ||||||||| ||     
    uccc c  cc  cgccguac gacuaugac cu    g
caug    u cc  --        a         -  cguc 


Annotation confidence Not enough data
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Genome context
JH977753.1: 32310-32386 [-]
Clustered miRNAs
4 other miRNAs are < 10 kb from efu-mir-9186l
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9186l

Accession MIMAT0034904
Description Eptesicus fuscus efu-miR-9186l mature miRNA
Sequence 11 - UUGCGGUAUGGCUGGUACUGAGA - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545