miRBase entry: efu-mir-1307

Stem-loop efu-mir-1307


Accession
MI0028652
Description
Eptesicus fuscus efu-mir-1307 precursor miRNA
Gene family
MIPF0000558; mir-1307


Sequence

ccuaccaaucUCGACCGGACCUCGACCGGCUCGUcuauguugccaaucgacucggcguggcgucggucgugguagauaggug
.((((((....(((((((.((.((.((((.(((..............))).)))))).))..))))))))))))).......

Structure
------c      aucU       -A  U  A    C   Ucuaug 
       cuacca    CGACCGG  CC CG CCGG UCG      u
       ||||||    |||||||  || || |||| |||       
       gauggu    gcuggcu  gg gc ggcu agc      u
guggaua      ----       gc  u  -    c   uaaccg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH977636.1: 6677293-6677374 [-]

Database links

Mature efu-miR-1307

Accession MIMAT0034967
Description Eptesicus fuscus efu-miR-1307 mature miRNA
Sequence 11 - UCGACCGGACCUCGACCGGCUCGU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545