miRBase entry: efu-mir-9304

Stem-loop efu-mir-9304


Accession
MI0028662
Description
Eptesicus fuscus efu-mir-9304 precursor miRNA


Sequence

guugggaauuGAAGCCCCUUGAAGGGCCAGGGGgguccaaccugugucccugcucccccggcgucuucgcggcgucagcaccugaa
.(((((..((((.(((...(((((((((.(((((((...((....))....))))))).))).)))))).))).))))..))))).

Structure
g     aa    A   CCU      -   A       -cca  c 
 uuggg  uuGA GCC   UGAAGG GCC GGGGggu    ac u
 |||||  |||| |||   |||||| ||| |||||||    ||  
 agucc  gacu cgg   gcuucu cgg ccccucg    ug g
a     ac    g   --c      g   c       uccc  u 


Annotation confidence Not enough data
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Genome context
JH977628.1: 14079188-14079273 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-9304
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9304

Accession MIMAT0034977
Description Eptesicus fuscus efu-miR-9304 mature miRNA
Sequence 11 - GAAGCCCCUUGAAGGGCCAGGGG - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545