miRBase entry: efu-mir-429

Stem-loop efu-mir-429


Accession
MI0028699
Description
Eptesicus fuscus efu-mir-429 precursor miRNA
Gene family
MIPF0000019; mir-8


Sequence

ugugaugggcgucuuaccagacacgguuagaccuggguccuucuguCUAAUACUGUCUGGUAAUGCCGUccauccacgg
(((((((((((.(((((((((((..(((((((..(((....))))))))))..)))))))))).).))))))).)))).

Structure
-    -       u -          cg       cu   u 
 ugug augggcg c uuaccagaca  guuagac  ggg c
 |||| ||||||| | ||||||||||  |||||||  |||  
 gcac uaccUGC G AAUGGUCUGU  UAAUCug  ucu c
g    c       C U          CA       --   u 


Annotation confidence Not enough data
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Genome context
JH977681.1: 209798-209876 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from efu-mir-429
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-429

Accession MIMAT0035014
Description Eptesicus fuscus efu-miR-429 mature miRNA
Sequence 47 - CUAAUACUGUCUGGUAAUGCCGU - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545