Stem-loop efu-mir-3958

Accession

MI0028718

Description

Eptesicus fuscus efu-mir-3958 precursor miRNA

Gene family

MIPF0000018; mir-154

Sequence

uguucgaaaggagguuguccgugauguauuugcuuugaugauggCAGAUAUUGCACGGUUGAUCUCUUuuccucaucc
.....(((((((((((..(((((..(((((((((........)))))))))..)))))..))))))))))).......

Structure

--uguuc           gu     au         uug 
       gaaaggagguu  ccgug  guauuugcu   a
       |||||||||||  |||||  |||||||||    
       cuuUUCUCUAG  GGCAC  UAUAGACgg   u
ccuacuc           UU     GU         uag 

Annotation confidence Not enough data

Genome context

JH977717.1: 858317-858394 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from efu-mir-3958

Mature efu-miR-3958

• Accession: MIMAT0035033
• Description: Eptesicus fuscus efu-miR-3958 mature miRNA
• Sequence: 45 - CAGAUAUUGCACGGUUGAUCUCUU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24692655
   Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
   "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
   "Mol Biol Evol (2014) 31:1536-1545