miRBase entry: efu-mir-202

Stem-loop efu-mir-202


Accession
MI0028744
Description
Eptesicus fuscus efu-mir-202 precursor miRNA
Gene family
MIPF0000121; mir-202


Sequence

ugguuccuuuuuccuaugcauauacuucuuugagggucuggccUAAAGAGGUGUAAGGCAUGGGAAAAuggggcggcg
..(((((.(((((((((((.(((((((((((.(((......))))))))))))))..))))))))))).)))))....

Structure
--ug     u           -a           g   gu 
    guucc uuuuccuaugc  uauacuucuuu agg  c
    ||||| |||||||||||  ||||||||||| |||   
    cgggg AAAAGGGUACG  AUGUGGAGAAA Ucc  u
gcgg     u           GA           -   gg 


Annotation confidence Not enough data
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Genome context
JH977636.1: 17707843-17707920 [+]

Database links

Mature efu-miR-202

Accession MIMAT0035057
Description Eptesicus fuscus efu-miR-202 mature miRNA
Sequence 44 - UAAAGAGGUGUAAGGCAUGGGAAAA - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545