miRBase entry: efu-mir-31

Stem-loop efu-mir-31


Accession
MI0028751
Description
Eptesicus fuscus efu-mir-31 precursor miRNA
Gene family
MIPF0000064; mir-31


Sequence

aacuggagaggaggcaagaugcuggcauagcuguugaauugagaaccUGCUAUGCCAACAUAUUGCCAUCUcucuugucug
.((.(((((((.(((((.(((.(((((((((.(((........)))..))))))))).))).))))).))))))).))...

Structure
--a  u       a     g   c         -u   gaa 
   ac ggagagg ggcaa aug uggcauagc  guu   u
   || ||||||| ||||| ||| |||||||||  |||    
   ug ucucUCU CCGUU UAC ACCGUAUCG  caa   u
guc  u       A     A   A         Uc   gag 


Annotation confidence Not enough data
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Genome context
JH977707.1: 4846061-4846141 [+]

Database links

Mature efu-miR-31

Accession MIMAT0035064
Description Eptesicus fuscus efu-miR-31 mature miRNA
Sequence 48 - UGCUAUGCCAACAUAUUGCCAUCU - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545