miRBase entry: efu-mir-9333

Stem-loop efu-mir-9333


Accession
MI0028772
Description
Eptesicus fuscus efu-mir-9333 precursor miRNA


Sequence

ucagcuuagcCUCACAACAGCCCCAGUGAGGUguuaaaacaacucaucuuacuggugugggugcugagacugg
.(((((((((((((((......(((((((((((...........))))))))))))))))).)))))).))).

Structure
u   -      -      ACAGCC           uuaa 
 cag cuuagc CUCACA      CCAGUGAGGUg    a
 ||| |||||| ||||||      |||||||||||    a
 guc gagucg gggugu      ggucauucuac    c
g   a      u      ------           ucaa 


Annotation confidence Not enough data
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Genome context
JH977615.1: 15745691-15745763 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from efu-mir-9333
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9333

Accession MIMAT0035081
Description Eptesicus fuscus efu-miR-9333 mature miRNA
Sequence 11 - CUCACAACAGCCCCAGUGAGGU - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545