miRBase entry: efu-mir-338

Stem-loop efu-mir-338


Accession
MI0028791
Description
Eptesicus fuscus efu-mir-338 precursor miRNA
Gene family
MIPF0000097; mir-338


Sequence

gccguccuccCCAACAAGAUCCUGGUGCUGAGUgaugacucgcaacuccagcaucagugauuuuguugaagagggcagccu
((.((((((..((((((((((((((((((((((...........))).))))))))).))))))))))..)))))).))..

Structure
--  c      cC          -         -   gaug 
  gc guccuc  CAACAAGAUC CUGGUGCUG AGU    a
  || ||||||  |||||||||| ||||||||| |||    c
  cg cgggag  guuguuuuag gacuacgac uca    u
uc  a      aa          u         c   acgc 


Annotation confidence Not enough data
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Genome context
JH977722.1: 1021185-1021265 [+]

Database links

Mature efu-miR-338

Accession MIMAT0035098
Description Eptesicus fuscus efu-miR-338 mature miRNA
Sequence 11 - CCAACAAGAUCCUGGUGCUGAGU - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545