miRBase entry: efu-mir-874

Stem-loop efu-mir-874


Accession
MI0028796
Description
Eptesicus fuscus efu-mir-874 precursor miRNA
Gene family
MIPF0000401; mir-874


Sequence

uguuagcccugcggccccacgcaccaggguaagagagagucucauuucCUGCCCUGGCCCGAGGGACCGACUggcugggccu
..((((((...(((.(((.((..((((((((.((((........)))).))))))))..)).))).)))...))))))....

Structure
--ug      cug   c   a  ca        a    gag 
    uuagcc   cgg ccc cg  ccagggua gaga   u
    ||||||   ||| ||| ||  |||||||| ||||    
    ggucgg   GCC GGG GC  GGUCCCGU cuuu   c
uccg      UCA   A   A  CC        C    acu 


Annotation confidence Not enough data
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Genome context
JH977612.1: 8426564-8426645 [+]

Database links

Mature efu-miR-874

Accession MIMAT0035102
Description Eptesicus fuscus efu-miR-874 mature miRNA
Sequence 49 - CUGCCCUGGCCCGAGGGACCGACU - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545