miRBase entry: efu-mir-9339

Stem-loop efu-mir-9339


Accession
MI0028797
Description
Eptesicus fuscus efu-mir-9339 precursor miRNA


Sequence

gugcuggggcCAGAUUGAUGGUUGGCAGCUGGAUCccaggguugggcugcccagccucuguguucugcucagaaugccc
(.((.(((((((((.....(((((((((((.((((....)))).))))).)))))))))).))))))).).........

Structure
--------- u  u     -    UUGAU      -     G    c 
         g gc ggggc CAGA     GGUUGG CAGCU GAUC c
         | || ||||| ||||     |||||| ||||| ||||  
         c cg ucuug gucu     ccgacc gucgg uugg a
cccguaaga u  -     u    -----      c     g    g 


Annotation confidence Not enough data
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Genome context
JH977775.1: 28592-28670 [-]

Database links

Mature efu-miR-9339

Accession MIMAT0035103
Description Eptesicus fuscus efu-miR-9339 mature miRNA
Sequence 11 - CAGAUUGAUGGUUGGCAGCUGGAUC - 35
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545