miRBase entry: efu-mir-1-1

Stem-loop efu-mir-1-1


Accession
MI0028831
Description
Eptesicus fuscus efu-mir-1-1 precursor miRNA
Gene family
MIPF0000038; mir-1


Sequence

uacucagaguacauacuucuuuauguacccauaugaacauacaaugcuaUGGAAUGUAAAGAAGUAUGUAUuuuugguagg
((((.(((((((((((((((((((((..(((((..(........)..))))).))))))))))))))))))))).))))..

Structure
--    c                     ac     ug aca 
  uacu agaguacauacuucuuuaugu  ccaua  a   u
  |||| |||||||||||||||||||||  |||||  |    
  augg uuuUAUGUAUGAAGAAAUGUA  GGUau  u   a
gg    u                     -A     cg aac 


Annotation confidence Not enough data
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Genome context
JH977615.1: 27070873-27070953 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-1-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-1

Accession MIMAT0035129
Description Eptesicus fuscus efu-miR-1 mature miRNA
Sequence 50 - UGGAAUGUAAAGAAGUAUGUAU - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545