miRBase entry: efu-mir-181d

Stem-loop efu-mir-181d


Accession
MI0028835
Description
Eptesicus fuscus efu-mir-181d precursor miRNA
Gene family
MIPF0000007; mir-181


Sequence

agucacaaucAACAUUCAUUGUUGUCGGUGGGUUgugaggacggaggccagacccaccgagggaugaaugucacuguggcuggg
(((((((....(((((((((....((((((((((....((.(....))).))))))))))..)))))))))...)))))))...

Structure
---       aucA         GUUG          guga  a g 
   agucaca    ACAUUCAUU    UCGGUGGGUU    gg c g
   |||||||    |||||||||    ||||||||||    || |  
   ucggugu    uguaaguag    agccacccag    cc g a
ggg       -cac         --gg          ---a  - g 


Annotation confidence Not enough data
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Genome context
JH977789.1: 1151535-1151618 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-181d
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-181d

Accession MIMAT0035133
Description Eptesicus fuscus efu-miR-181d mature miRNA
Sequence 11 - AACAUUCAUUGUUGUCGGUGGGUU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545