miRBase entry: efu-mir-9186b-3

Stem-loop efu-mir-9186b-3


Accession
MI0028837
Description
Eptesicus fuscus efu-mir-9186b-3 precursor miRNA
Gene family
MIPF0001868; mir-9186


Sequence

agggggagguuggcgguaucacugguacugagguaauggcuguccacAGUACCAGACAUGCCGCCCUCcucccccuac
(((((((((..((((((((..(((((((((.((..........)).)))))))))..))))))))..)))))))))..

Structure
--         uu        ca         a  uaau 
  agggggagg  ggcgguau  cugguacug gg    g
  |||||||||  ||||||||  ||||||||| ||     
  ucccccucC  CCGCCGUA  GACCAUGAc cc    g
ca         UC        CA         a  uguc 


Annotation confidence Not enough data
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Genome context
JH977753.1: 67063-67140 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-9186b-3
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9186b

Accession MIMAT0035022
Description Eptesicus fuscus efu-miR-9186b mature miRNA
Sequence 48 - AGUACCAGACAUGCCGCCCUC - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545