miRBase entry: efu-mir-126

Stem-loop efu-mir-126


Accession
MI0028878
Description
Eptesicus fuscus efu-mir-126 precursor miRNA
Gene family
MIPF0000115; mir-126


Sequence

ggcgacgggacauuauuacuuuugguacgcgcugugacacuucaaaCUCGUACCGUGAGUAAUAAUGCGccgucggcag
(.((((((..(((((((((((.(((((((.....(((....)))....))))))).)))))))))))..)))))).)..

Structure
-- g      ga           u       cgcug   c 
  g cgacgg  cauuauuacuu ugguacg     uga a
  | ||||||  ||||||||||| |||||||     |||  
  c gcugcc  GUAAUAAUGAG GCCAUGC     acu c
ga g      GC           U       -UCaa   u 


Annotation confidence Not enough data
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Genome context
JH977690.1: 1315382-1315460 [+]

Database links

Mature efu-miR-126

Accession MIMAT0035169
Description Eptesicus fuscus efu-miR-126 mature miRNA
Sequence 47 - CUCGUACCGUGAGUAAUAAUGCG - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545