miRBase entry: efu-mir-9359

Stem-loop efu-mir-9359


Accession
MI0028879
Description
Eptesicus fuscus efu-mir-9359 precursor miRNA


Sequence

cagaugugggaaauguccaggaggaagggggaugguuggcuguccaggagcUAAUUACCCCUGAUCUCACAAAUCUcacccaaggu
.....((((((..(((....((((..(((((.(((((((((.......))))))))))))))..)))))))..)))))).......

Structure
--cagau      aa   ccag    aa     a         gu 
       guggga  ugu    gagg  ggggg ugguuggcu  c
       ||||||  |||    ||||  ||||| |||||||||  c
       cacUCU  ACA    CUCU  UCCCC AUUAAUcga  a
uggaacc      AA   ----    AG     -         gg 


Annotation confidence Not enough data
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Genome context
JH977650.1: 2125003-2125088 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-9359
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9359

Accession MIMAT0035170
Description Eptesicus fuscus efu-miR-9359 mature miRNA
Sequence 52 - UAAUUACCCCUGAUCUCACAAAUCU - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545