miRBase entry: efu-mir-9361

Stem-loop efu-mir-9361


Accession
MI0028881
Description
Eptesicus fuscus efu-mir-9361 precursor miRNA


Sequence

cccuuacucauagcuuccuaagguucauuuccauccugagggggaAAAGAAUCAGAUGAGCUGAAggagagauac
.((((.....((((((.....(((((.(((((.(((...)))))))).)))))....))))))))))........

Structure
-------c    acuca      ccuaa     a     a   u 
        ccuu     uagcuu     gguuc uuucc ucc  
        ||||     ||||||     ||||| ||||| ||| g
        ggAA     GUCGAG     CUAAG AAagg ggg  
cauagaga    -----      -UAGA     A     -   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH977650.1: 2129696-2129770 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-9361
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-9361

Accession MIMAT0035172
Description Eptesicus fuscus efu-miR-9361 mature miRNA
Sequence 46 - AAAGAAUCAGAUGAGCUGAA - 65
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545