miRBase entry: efu-mir-507a

Stem-loop efu-mir-507a


Accession
MI0028896
Description
Eptesicus fuscus efu-mir-507a precursor miRNA
Gene family
MIPF0000130; mir-506


Sequence

ugcagugcucCACUUCAGGAGGUGCCACUCAUGUagcuaacaauaugauuggcaucucuuaaagugagguaaugcaca
((((.((((.(((((.(((((((((((.((((((........)))))).))))))))))).))))).)))).))))..

Structure
--    g    c     C           C      agc 
  ugca ugcu CACUU AGGAGGUGCCA UCAUGU   u
  |||| |||| ||||| ||||||||||| ||||||    
  acgu augg gugaa uucucuacggu aguaua   a
ac    a    a     a           u      aca 


Annotation confidence Not enough data
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Genome context
JH977855.1: 595065-595142 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from efu-mir-507a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature efu-miR-507a

Accession MIMAT0035184
Description Eptesicus fuscus efu-miR-507a mature miRNA
Sequence 11 - CACUUCAGGAGGUGCCACUCAUGU - 34
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24692655
    Large numbers of novel miRNAs originate from DNA transposons and are coincident with a large species radiation in bats
    "Platt RN 2nd, Vandewege MW, Kern C, Schmidt CJ, Hoffmann FG, Ray DA"
    "Mol Biol Evol (2014) 31:1536-1545