miRBase entry: dme-mir-9378

Stem-loop dme-mir-9378


Accession
MI0028927
Description
Drosophila melanogaster dme-mir-9378 precursor miRNA


Sequence

86 reads, 8 reads per million, 26 experiments
AGUGGAGUGAGACCUCGAGUUCGGgcaaaucugauagccGAACGGGAGUUUCCUCCAUUGGg
(((((((.(((((.((..((((((.............))))))..))))))))))))))...

Structure
---       U     C  GA      gcaaa 
   AGUGGAG GAGAC UC  GUUCGG     u
   ||||||| ||||| ||  ||||||     c
   UUACCUC CUUUG AG  CAAGcc     u
gGG       -     -  GG      gauag 


Annotation confidence Not enough data
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Genome context
chr2L: 10751877-10751938 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from dme-mir-9378
Name Accession Chromosome Start End Strand Confidence




Database links

Mature dme-miR-9378-5p

Accession MIMAT0035219
Description Drosophila melanogaster dme-miR-9378-5p mature miRNA
Sequence 1 - AGUGGAGUGAGACCUCGAGUUCGG - 24
Evidence experimental
Illumina [1]

Mature dme-miR-9378-3p

Accession MIMAT0035220
Description Drosophila melanogaster dme-miR-9378-3p mature miRNA
Sequence 40 - GAACGGGAGUUUCCUCCAUUGG - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23882112
    The impact of age, biogenesis, and genomic clustering on Drosophila microRNA evolution
    "Mohammed J, Flynt AS, Siepel A, Lai EC"
    "RNA (2013) 19:1295-1308