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miRBase |
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Stem-loop sequence sly-MIR169e |
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Accession | MI0029121 (change log) | ||||
Description | Solanum lycopersicum miR169e stem-loop | ||||
Gene family | MIPF0000012; MIR169_1 | ||||
Literature search |
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16 open access papers mention sly-MIR169e | ||||
Stem-loop |
-a - c u auu ucuauu u a a u caaug uuu aa u au 5' ggaggaga gg cu acauga agaagaguu uguu agu gccaaggaug cuugcc uucau ccu gua auggaaa ug u |||||||| || || |||||| ||||||||| |||| ||| |||||||||| |||||| ||||| ||| ||| ||||||| || a 3' cuucuucu cc ga uguacu ucuucucaa acag uca cgguuucuac gaacgg gagua ggg uau uaucuuu ac c uc a u u guu ------ u g - u --aaa --u gg c aa |
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Confidence |
Annotation confidence: not enough data
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Genome context |
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Database links |
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Mature sequence sly-miR169e-5p |
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Accession | MIMAT0035475 |
Sequence |
47 - uagccaaggaugacuugccuuu - 68 |
Evidence | experimental; Illumina [1] |
Mature sequence sly-miR169e-3p |
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Accession | MIMAT0035476 |
Sequence |
132 - uggcaagcaucuuuggcgacu - 152 |
Evidence | experimental; Illumina [1] |
References |
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1 |
PMID:24376253
"Global and local perturbation of the tomato microRNA pathway by a trans-activated DICER-LIKE 1 mutant"
J Exp Bot. 65:725-739(2014).
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