miRBase entry: bdi-MIR9480a

Stem-loop bdi-MIR9480a


Accession
MI0029127
Description
Brachypodium distachyon bdi-MIR9480a precursor miRNA


Sequence

ccuuacaagauaacauauaccacguacauacuuaagggUAUGUGAGGGUGGUAACUGAAugugugagggu
(((((((......((..((((((.((((((((....))))))))...))))))..))....)))))))..

Structure
--       agauaa  ua      --g        u 
  ccuuaca      ca  uaccac   uacauacu a
  |||||||      ||  ||||||   ||||||||  
  ggagugu      GU  AUGGUG   GUGUAUgg a
ug       --guAA  CA      GGA        g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
4: 31011548-31011617 [-]

Database links

Mature bdi-miR9480a

Accession MIMAT0035485
Description Brachypodium distachyon bdi-miR9480a mature miRNA
Sequence 39 - UAUGUGAGGGUGGUAACUGAA - 59
Evidence not_experimental

References

  1. PubMed ID: 24367943
    Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
    Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
    Genome Biol (2013) 14:R145