miRBase entry: bdi-MIR9499

Stem-loop bdi-MIR9499


Accession
MI0029150
Description
Brachypodium distachyon bdi-MIR9499 precursor miRNA


Sequence

ucgucuCCCUCGUCGACGCGGCAGCUCagaaggcgcgcgacgugccugcgcgugagaugccgugucggcggggacgaggacc
((.((((((.(((((((((((((.((((..(((((((...))))))).....)))).))))))))))))))))).)).))..

Structure
--  g  -    U             G    ---ga       c 
  uc uc uCCC CGUCGACGCGGCA CUCa     aggcgcg  
  || || |||| ||||||||||||| ||||     ||||||| g
  ag ag aggg gcggcugugccgu gagu     uccgugc  
cc  g  c    -             a    gcgcg       a 


Annotation confidence Not enough data
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Genome context
4: 17265172-17265253 [-]

Database links

Mature bdi-miR9499

Accession MIMAT0035508
Description Brachypodium distachyon bdi-miR9499 mature miRNA
Sequence 7 - CCCUCGUCGACGCGGCAGCUC - 27
Evidence not_experimental

References

  1. PubMed ID: 24367943
    Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
    Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
    Genome Biol (2013) 14:R145