miRBase entry: bdi-MIR1432

Stem-loop bdi-MIR1432


Accession
MI0029172
Description
Brachypodium distachyon bdi-MIR1432 precursor miRNA


Sequence

uccuuugUUCAGGAGAGAUGACACCGACAucgaucugaugggucggcucaguucaauuaguuacuaggccauguguguccauccgcuuggagugggugucaucuccccugaacauaggacg
((((.((((((((.(((((((((((.((.((((.(.((((((.(((((.(((..........))).))))......))))))).).)))).)).))))))))))).)))))))).))))..

Structure
--    u        A           G  A    u u      u ------    c   ucaa 
  uccu ugUUCAGG GAGAUGACACC AC ucga c gauggg c      ggcu agu    u
  |||| |||||||| ||||||||||| || |||| | |||||| |      |||| |||     
  agga acaagucc cucuacugugg ug gguu g cuaccu g      ccgg uca    u
gc    u        c           g  a    c c      - ugugua    a   uuga 


Annotation confidence Not enough data
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Genome context
1: 18961246-18961366 [+]

Database links

Mature bdi-miR1432

Accession MIMAT0035530
Description Brachypodium distachyon bdi-miR1432 mature miRNA
Sequence 8 - UUCAGGAGAGAUGACACCGACA - 29
Evidence not_experimental

References

  1. PubMed ID: 24367943
    Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
    Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
    Genome Biol (2013) 14:R145