miRBase entry: bdi-MIR5281a

Stem-loop bdi-MIR5281a


Accession
MI0029183
Description
Brachypodium distachyon bdi-MIR5281a precursor miRNA


Sequence

acucccuucguuccuauuuauaagacgucuuggcaagucaauuuggcuugccaaaacgUCUUAUAAAUAGGAACGGAGGgaauac
..((((((((((((((((((((((((((.(((((((((((...))))))))))).))))))))))))))))))))))))))....

Structure
--ac                          c           a 
    ucccuucguuccuauuuauaagacgu uuggcaaguca  
    |||||||||||||||||||||||||| ||||||||||| u
    agGGAGGCAAGGAUAAAUAUUCUgca aaccguucggu  
caua                          a           u 


Annotation confidence Not enough data
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Genome context
3: 11656552-11656636 [+]

Database links

Mature bdi-miR5281a

Accession MIMAT0035540
Description Brachypodium distachyon bdi-miR5281a mature miRNA
Sequence 59 - UCUUAUAAAUAGGAACGGAGG - 79
Evidence not_experimental

References

  1. PubMed ID: 24367943
    Parallel analysis of RNA ends enhances global investigation of microRNAs and target RNAs of Brachypodium distachyon
    Jeong DH, Schmidt SA, Rymarquis LA, Park S, Ganssmann M, German MA, Accerbi M, Zhai J, Fahlgren N, Fox SE, Garvin DF, Mockler TC, Carrington JC, Meyers BC, Green PJ
    Genome Biol (2013) 14:R145