Stem-loop bra-MIR9556

Accession

MI0029302

Description

Brassica rapa bra-MIR9556 precursor miRNA

Literature search

1 open access papers mention bra-MIR9556
(1 sentences)

Sequence

auuGUCAAUUGGUGAUAGUAGUUCuuaagcguuauaguggauuucuaucucacgguugcuugaguuauUCUACUUUCACCAAUUGGCCUu
...((((((((((((.(((((..((((((((.....((((((....))).)))...)))))))).....))))).))))))))))))...

Structure

auu            U     ---UU        uuaua   -   u 
   GUCAAUUGGUGA AGUAG     Cuuaagcg     gug gau u
   |||||||||||| |||||     ||||||||     ||| |||  
   CGGUUAACCACU UCAUC     gaguucgu     cac cua c
uUC            U     Uuauu        --ugg   u   u 

Annotation confidence Not enough data

Genome context

chrA7: 19158445-19158534 [-]

Mature bra-miR9556-5p

• Accession: MIMAT0035665
• Description: Brassica rapa bra-miR9556-5p mature miRNA
• Sequence: 4 - GUCAAUUGGUGAUAGUAGUUC - 24
• Evidence: experimental ; Illumina [1]

Mature bra-miR9556-3p

• Accession: MIMAT0035666
• Description: Brassica rapa bra-miR9556-3p mature miRNA
• Sequence: 69 - UCUACUUUCACCAAUUGGCCU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24559317
   Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis
   Jiang J, Lv M, Liang Y, Ma Z, Cao J
   BMC Genomics (2014) 15:146