miRBase entry: bra-MIR9567

Stem-loop bra-MIR9567


Accession
MI0029316
Description
Brassica rapa bra-MIR9567 precursor miRNA

Literature search
1 open access papers mention bra-MIR9567
(1 sentences)

Sequence

auuaguuacgcaucUAAACAACACAUAUAGUUUGCaggguggauaaaacuggcauuauauguaacaagacgguagaacauauaaugcuaguuuguuccacccugcAAACUAUAUGUGUUGCUUAGAugcguaacuugg
...((((((((((((((.(((((((((((((((((((((((((..(((((((((((((((((.((......))...)))))))))))))))))..))))))))))))))))))))))))).))))))))))))))...

Structure
auu              A                         ua                 --a  aa 
   aguuacgcaucUAA CAACACAUAUAGUUUGCagggugga  aaacuggcauuauaugu   ac  g
   |||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||   ||   
   ucaaugcguAGAUU GUUGUGUAUAUCAAAcgucccaccu  uuugaucguaauauaca   ug  a
ggu              C                         ug                 aga  gc 


Annotation confidence Not enough data
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Genome context
chrA3: 17824435-17824572 [+]

Database links

Mature bra-miR9567-5p

Accession MIMAT0035693
Description Brassica rapa bra-miR9567-5p mature miRNA
Sequence 15 - UAAACAACACAUAUAGUUUGC - 35
Evidence experimental
Illumina [1]

Mature bra-miR9567-3p

Accession MIMAT0035694
Description Brassica rapa bra-miR9567-3p mature miRNA
Sequence 106 - AAACUAUAUGUGUUGCUUAGA - 126
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24559317
    Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis
    Jiang J, Lv M, Liang Y, Ma Z, Cao J
    BMC Genomics (2014) 15:146