Stem-loop gga-mir-33-2

Accession

MI0029334

Description

Gallus gallus gga-mir-33-2 precursor miRNA

Literature search

8 open access papers mention gga-mir-33-2
(121 sentences)

Sequence

24484 reads, 293 reads per million, 5 experiments

cggcccucgcggggGUGCAUUGUAGUUGCAUUGCAUgugucagacugggagugcaaugccccugccaugcagcccggcggggguccc
.(((((((((.(((.(((((.((((..(((((((((...(((...)))..)))))))))..)))).))))).))).)))))))))..

Structure

-c         g   G     U    UU         gug   g 
  ggcccucgc ggg UGCAU GUAG  GCAUUGCAU   uca  
  ||||||||| ||| ||||| ||||  |||||||||   ||| a
  cugggggcg ccc acgua cguc  cguaacgug   ggu  
cc         g   g     c    cc         -ag   c 

Annotation confidence Not enough data

Genome context

chr14: 4937943-4938029 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-33-2

Mature gga-miR-33-2-5p

• Accession: MIMAT0037539
• Description: Gallus gallus gga-miR-33-2-5p mature miRNA
• Sequence: 15 - GUGCAUUGUAGUUGCAUUGCAU - 36
• Evidence: not_experimental

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196