miRBase entry: gga-mir-203b

Stem-loop gga-mir-203b


Accession
MI0029341
Description
Gallus gallus gga-mir-203b precursor miRNA

Literature search
16 open access papers mention gga-mir-203b
(151 sentences)

Sequence

3584 reads, 4 reads per million, 5 experiments
cgggccucgcuggucaagugguccuaaacauuucacaauuaugauagagaacugUUGAACUGUUAAGAACCACUGCaccaaggaggcugagg
..((((((..((((..((((((.((.((((.((((........((((....)))))))).)))).)).))))))..))))..))))))....

Structure
--cg      gc    ca      c  a    u    caauuaug    a 
    ggccuc  uggu  aguggu cu aaca uuca        auag g
    ||||||  ||||  |||||| || |||| ||||        ||||  
    ucggag  acca  UCACCA GA UUGU AAGU        Uguc a
ggag      ga    CG      A  A    C    --------    a 


Annotation confidence Not enough data
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Genome context
chr5: 50769282-50769373 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from gga-mir-203b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gga-miR-203b-3p

Accession MIMAT0037548
Description Gallus gallus gga-miR-203b-3p mature miRNA
Sequence 55 - UUGAACUGUUAAGAACCACUGC - 76
Evidence not_experimental

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196