miRBase entry: aca-mir-19c

Stem-loop aca-mir-19c

Accession

MI0029349

Description

Anolis carolinensis aca-mir-19c precursor miRNA

Sequence

uaccaccacagucaguuuugcauggauuugcacagcgacggacagcaagcuggGAUGCAAACCUGCAAAACGGACuguagauca
.......((((((.((((((((.((.((((((((((............))))...)))))))))))))))).))))))......

Structure

uaccacc      a        u  a      ---    gacgg 
       acaguc guuuugca gg uuugca   cagc     a
       |||||| |||||||| || ||||||   ||||      
       uguCAG CAAAACGU CC AAACGU   gucg     c
-acuaga      G        -  -      AGg    aacga

Annotation confidence Not enough data

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Genome context

GL344214.1: 24230-24313 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from aca-mir-19c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aca-miR-19c-3p

Accession	MIMAT0037560
Description	Anolis carolinensis aca-miR-19c-3p mature miRNA
Sequence	54 - GAUGCAAACCUGCAAAACGGAC - 75
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196