miRBase entry: aca-mir-222b

Stem-loop aca-mir-222b


Accession
MI0029356
Description
Anolis carolinensis aca-mir-222b precursor miRNA


Sequence

ggaugccaaugggcUGCUCAGUAGUCGGUGUAGAAUCugucugaugauacccacAGCUACAUCUGAUUACUGGGUUUCcuguggcaucag
.(((((((..(((..((((((((((((((((((....((((....)))).......))))).))))))))))))).)))..)))))))..

Structure
-g       au   cU             -     ---AAUC    u 
  gaugcca  ggg  GCUCAGUAGUCGG UGUAG       uguc g
  |||||||  |||  ||||||||||||| |||||       ||||  
  cuacggu  cCU  UGGGUCAUUAGUC ACAUC       auag a
ga       gu   -U             U     GAcaccc    u 


Annotation confidence Not enough data
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Genome context
GL343528.1: 405265-405354 [+]

Database links

Mature aca-miR-222b-5p

Accession MIMAT0037570
Description Anolis carolinensis aca-miR-222b-5p mature miRNA
Sequence 15 - UGCUCAGUAGUCGGUGUAGAAUC - 37
Evidence experimental
Illumina [1]

Mature aca-miR-222b-3p

Accession MIMAT0037571
Description Anolis carolinensis aca-miR-222b-3p mature miRNA
Sequence 55 - AGCUACAUCUGAUUACUGGGUUUC - 78
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196