miRBase entry: aca-mir-9575

Stem-loop aca-mir-9575


Accession
MI0029364
Description
Anolis carolinensis aca-mir-9575 precursor miRNA


Sequence

cucuacaguccUUCUCAAAAUGGAAACAGGAAauagagucagaucacuUCUUGUUGUCAUUUUGAGAUGAacuuuauagaa
.((((.(((.(.(((((((((((.((((((((...((......))..)))))))).))))))))))).).)))...)))).

Structure
c    --c   c U           A        aua  gu 
 ucua   agu c UCUCAAAAUGG AACAGGAA   ga  c
 ||||   ||| | ||||||||||| ||||||||   ||   
 agau   uca G AGAGUUUUACU UUGUUCUu   cu  a
a    auu   A U           G        -ca  ag 


Annotation confidence Not enough data
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Genome context
GL343665.1: 173374-173454 [-]

Database links

Mature aca-miR-9575-5p

Accession MIMAT0037584
Description Anolis carolinensis aca-miR-9575-5p mature miRNA
Sequence 12 - UUCUCAAAAUGGAAACAGGAA - 32
Evidence experimental
Illumina [1]

Mature aca-miR-9575-3p

Accession MIMAT0037585
Description Anolis carolinensis aca-miR-9575-3p mature miRNA
Sequence 49 - UCUUGUUGUCAUUUUGAGAUGA - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196