miRBase entry: xtr-mir-460b

Stem-loop xtr-mir-460b


Accession
MI0029369
Description
Xenopus tropicalis xtr-mir-460b precursor miRNA


Sequence

ugacucuacauuguccucauuguacaugcuguguguaucuauuucucuuaCACAGCGCAUGCAAUGUGGAUAuauuggauguc
.(((((((...(((((.(((((((..(((((((((.............)))))))))..))))))).)))))...)))).)))

Structure
u   -    cau     u       ca         uaucu 
 gac ucua   ugucc cauugua  ugcugugug     a
 ||| ||||   ||||| |||||||  |||||||||     u
 cug aggu   AUAGG GUAACGU  GCGACACau     u
-   u    uau     U       AC         ucucu 


Annotation confidence Not enough data
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Genome context
chr8: 44862150-44862232 [+]

Database links

Mature xtr-miR-460b-3p

Accession MIMAT0037592
Description Xenopus tropicalis xtr-miR-460b-3p mature miRNA
Sequence 51 - CACAGCGCAUGCAAUGUGGAUA - 72
Evidence not_experimental

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196