miRBase entry: cpi-let-7a-2

Stem-loop cpi-let-7a-2


Accession
MI0029372
Description
Chrysemys picta cpi-let-7a-2 precursor miRNA


Sequence

gcaugcauccagguUGAGGUAGUAGGUUGUAUAGUUuagaauuacaccaagggagauaaCUGUACAACCUCCUAGCUUUCCuugggucuugcacaa
(((.(.(((((((..(((.(((.(((((((((((((.....................))))))))))))).))).)))..)))))))).)))....

Structure
----   u c       uU   G   U             uagaauuac 
    gca g auccagg  GAG UAG AGGUUGUAUAGUU         a
    ||| | |||||||  ||| ||| |||||||||||||         c
    cgu c uggguuC  UUC AUC UCCAACAUGUCaa         c
aaca   u -       CU   G   C             uagagggaa 


Annotation confidence Not enough data
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Genome context
KK088232.1: 2328699-2328794 [-]

Database links

Mature cpi-let-7a-5p

Accession MIMAT0037594
Description Chrysemys picta cpi-let-7a-5p mature miRNA
Sequence 15 - UGAGGUAGUAGGUUGUAUAGUU - 36
Evidence experimental
Illumina [1]

Mature cpi-let-7a-2-3p

Accession MIMAT0037596
Description Chrysemys picta cpi-let-7a-2-3p mature miRNA
Sequence 60 - CUGUACAACCUCCUAGCUUUCC - 81
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196