miRBase entry: cpi-mir-7b

Stem-loop cpi-mir-7b


Accession
MI0029390
Description
Chrysemys picta cpi-mir-7b precursor miRNA


Sequence

uucugggucggucUGGAAGACUUGUGAUUUUGUUGUuuccagugucagggaagcgaacaacaaaucccagucuccucacagccccaggacug
(((((((.(.((..(((.((((.(.(((((((((((((((........)))))).))))..)))))).)))))))..)).).)))))))...

Structure
---       u g  cU   A    U U     --    -      agu 
   uucuggg c gu  GGA GACU G GAUUU  UGUU GUuucc   g
   ||||||| | ||  ||| |||| | |||||  |||| ||||||    
   aggaccc g ca  ccu cuga c cuaaa  acaa cgaagg   u
guc       c a  cu   -    c -     ca    g      gac 


Annotation confidence Not enough data
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Genome context
KK083007.1: 3181798-3181889 [+]

Database links

Mature cpi-miR-7b-5p

Accession MIMAT0037621
Description Chrysemys picta cpi-miR-7b-5p mature miRNA
Sequence 14 - UGGAAGACUUGUGAUUUUGUUGU - 36
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196