miRBase entry: cpi-mir-22

Stem-loop cpi-mir-22


Accession
MI0029410
Description
Chrysemys picta cpi-mir-22 precursor miRNA


Sequence

ccggcuaacuagcaccAGUUCUUCAGUGGCAAGCUUUAcgucccugucuagcagcuaAAGCUGCCAGUUGAAGAACUGUugaauguagccacucu
..(((((.....((.((((((((((((((((.((((((.(...((((...)))))))))))))))).))))))))))).))....))))).....

Structure
---cc     acuag  c           -     A      c ucc    c 
     ggcua     ca cAGUUCUUCAG UGGCA GCUUUA g   cugu  
     |||||     || ||||||||||| ||||| |||||| |   |||| u
     ccgau     gu GUCAAGAAGUU ACCGU CGAAau c   gacg  
ucuca     -guaa  U           G     -      - ---    a 


Annotation confidence Not enough data
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Genome context
KK082936.1: 7650182-7650276 [+]

Database links

Mature cpi-miR-22-5p

Accession MIMAT0037653
Description Chrysemys picta cpi-miR-22-5p mature miRNA
Sequence 17 - AGUUCUUCAGUGGCAAGCUUUA - 38
Evidence experimental
Illumina [1]

Mature cpi-miR-22-3p

Accession MIMAT0037654
Description Chrysemys picta cpi-miR-22-3p mature miRNA
Sequence 58 - AAGCUGCCAGUUGAAGAACUGU - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196