miRBase entry: cpi-mir-103-2

Stem-loop cpi-mir-103-2


Accession
MI0029450
Description
Chrysemys picta cpi-mir-103-2 precursor miRNA


Sequence

agcucugugcuuucAGCUUCUUUACAGUGCUGCCUUGUugcauucaugucaAGCAGCAUUGUACAGGGCUAUgaaagaacugagacccguuc
..(((.((.(((((((((.((.(((((((((((.(((..(((....))))))))))))))))).)))))..)))))).)).)))........

Structure
------ag   u  g      --   U  U           C   Uu   u 
        cuc gu cuuucA  GCU CU UACAGUGCUGC UUG  gca u
        ||| || ||||||  ||| || ||||||||||| |||  |||  
        gag ca gaaagU  CGG GA AUGUUACGACG Aac  ugu c
cuugccca   u  a      AU   -  C           -   --   a 


Annotation confidence Not enough data
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Genome context
KK082944.1: 6461372-6461463 [+]

Database links

Mature cpi-miR-103-3p

Accession MIMAT0037719
Description Chrysemys picta cpi-miR-103-3p mature miRNA
Sequence 52 - AGCAGCAUUGUACAGGGCUAU - 72
Evidence experimental
Illumina [1]

Mature cpi-miR-103-5p

Accession MIMAT0037720
Description Chrysemys picta cpi-miR-103-5p mature miRNA
Sequence 15 - AGCUUCUUUACAGUGCUGCCUUGU - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 24798503
    Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
    "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
    "Evol Dev (2014) 16:189-196